top of page

SAC - Sequencing and Assembly Committee

SAC - Sequencing and Assembly Committee

The Sequencing and Assembly Committee (SAC) fosters collaboration across the ERGA community by coordinating efforts and providing a platform to exchange ideas on genome sequencing and assembly methods. This inclusive framework helps bring together new and affiliated projects under the ERGA umbrella. Working closely with other committees, genome projects, and consortia, SAC promotes and ensures visibility of up-to-date workflows and standardised pipelines, supporting their alignment with Earth Biogenomes Project (EBP) mission and quality requirements while contributing to their development and adaptation. The committee focuses on end-to-end laboratory and analytical practices that deliver high-quality data for ERGA assemblies, including DNA extraction, library preparation and sequencing across platforms, as well as bioinformatic procedures for integrating data to generate high-quality genomes. The committee encourages the sharing of standardised SOPs, guidance, and troubleshooting advice. In addition, SAC develops and maintains a framework for assembly evaluation to ensure quality standards are met and complex cases are addressed through community feedback, thereby supporting continuous improvement and knowledge sharing.

(V.2.0 01.12.2025)


Chair

Tyler Alioto


Coordinator

Diego de Panis


Steering Committee

Camila Mazzoni

Henrik Lantz

Jean-Marc Aury

Kerstin Howe

Nadège Guiglielmoni

Looking for assistance and guidance with how to assemble a genome?

The Sequencing and Assembly Committee can help!


  • Join our Slack Channel! Here you can post your questions and start conversations with the Sequencing and Assembly community from the ERGA consortium.

  • Use our resources! Here we have a collection of Genome Assembly Workshops collected and curated by the members of the ERGA SAC.

  • Join our mailing list! Send an email to assembly@erga-biodiversity.eu to join the ERGA Sequencing and Assembly mailing list and get regular updates about the activities of the SAC.

  • Present at our meetings! Send and email to assembly@erga-biodiversity.eu to request a slot to present at a SAC meeting if you would like feedback on your project. We can advise on steps to improve an assembly or potential pipelines that you may find useful.



Resources

💡ERGA Knowledge Hub

▶️ ERGA SAC Youtube Playlist

🔗 Galaxy workflow for de-novo genome assembly using PacBio HiFi and HiC data

🔗 Galaxy workflow for de-novo genome assembly using ONT, Illumina WGS and HiC data




bottom of page